STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PFF8_AMBTCProtein kinase domain-containing protein. (502 aa)    
Predicted Functional Partners:
W1NEZ1_AMBTC
J domain-containing protein.
    
 
 0.887
W1PIN2_AMBTC
Uncharacterized protein.
   
 
 0.874
W1NZZ9_AMBTC
Uncharacterized protein.
    
 
 0.872
U5D232_AMBTC
Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.
    
 
 0.591
W1P1D6_AMBTC
Uncharacterized protein; Belongs to the SecY/SEC61-alpha family.
    
 
 0.591
U5DA29_AMBTC
Uncharacterized protein.
    
 0.559
W1PX53_AMBTC
Uncharacterized protein.
    
 0.559
U5CQD1_AMBTC
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.524
W1PUT7_AMBTC
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.524
W1PVX1_AMBTC
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.524
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.