STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PG04_AMBTCAminopeptidase. (855 aa)    
Predicted Functional Partners:
W1PJ72_AMBTC
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
     
 0.695
W1PQN7_AMBTC
SERPIN domain-containing protein; Belongs to the serpin family.
   
 0.666
W1P6D1_AMBTC
RPA_C domain-containing protein.
   
 
 0.551
W1PK55_AMBTC
RPA_C domain-containing protein.
   
 
 0.551
W1NED9_AMBTC
Uncharacterized protein; Belongs to the phosphohexose mutase family.
   
 
 0.539
U5D2D1_AMBTC
Dihydrolipoyl dehydrogenase.
  
 0.538
W1P5Y2_AMBTC
Uncharacterized protein.
  
 0.538
W1P656_AMBTC
AMP_N domain-containing protein.
  
 
 0.538
W1PN41_AMBTC
Dihydrolipoyl dehydrogenase.
  
 0.538
U5CZT1_AMBTC
Glutathione reductase; Maintains high levels of reduced glutathione.
  
 0.534
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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