STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PGT2_AMBTCUroporphyrinogen_deCOase domain-containing protein. (169 aa)    
Predicted Functional Partners:
W1P332_AMBTC
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
 
 0.983
U5CPA6_AMBTC
Uncharacterized protein.
  
 0.977
W1PAA6_AMBTC
Amino_oxidase domain-containing protein.
 
 
 0.975
U5D6V8_AMBTC
TP_methylase domain-containing protein; Belongs to the precorrin methyltransferase family.
    
 0.955
W1NRY6_AMBTC
Uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
   
 
 0.932
W1PCN8_AMBTC
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 
 
0.920
W1P3Y2_AMBTC
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
  
 
0.901
U5D238_AMBTC
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
  
 0.852
W1NKQ0_AMBTC
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
  
 0.847
U5CXV8_AMBTC
Uncharacterized protein.
  
 0.808
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
Server load: low (30%) [HD]