STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PGZ4_AMBTCCTP_transf_like domain-containing protein. (58 aa)    
Predicted Functional Partners:
W1NXI1_AMBTC
Uncharacterized protein.
   
 
 0.700
W1PAA3_AMBTC
Uncharacterized protein.
     
 0.696
W1PDZ8_AMBTC
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.613
W1PHM3_AMBTC
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.613
W1PWH7_AMBTC
Uncharacterized protein.
      
 0.508
W1P571_AMBTC
Aminotran_5 domain-containing protein.
  
  
 0.472
W1NWX7_AMBTC
Uncharacterized protein; Belongs to the TPP enzyme family.
  
 
 0.470
U5D252_AMBTC
Uncharacterized protein; Belongs to the TPP enzyme family.
  
 
 0.469
U5DE48_AMBTC
TPP_enzyme_C domain-containing protein.
  
 
 0.469
W1NP44_AMBTC
TPP_enzyme_M domain-containing protein.
  
 
 0.469
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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