STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PH93_AMBTCNTP_transferase domain-containing protein. (415 aa)    
Predicted Functional Partners:
W1NI90_AMBTC
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
 
 0.985
W1PDN1_AMBTC
NTP_transferase domain-containing protein.
  
0.979
W1PJY2_AMBTC
NTP_transferase domain-containing protein.
  
0.979
U5D7E5_AMBTC
NAD(P)-bd_dom domain-containing protein.
    
 0.957
W1NV05_AMBTC
Epimerase domain-containing protein.
  
 
 0.944
U5CU20_AMBTC
Nudix hydrolase domain-containing protein.
   
 0.909
W1P610_AMBTC
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
  
 
 0.900
U5CZ49_AMBTC
Glyco_trans_4-like_N domain-containing protein.
  
 0.865
W1NF83_AMBTC
Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.
     
 0.863
U5DCM3_AMBTC
eIF2B_5 domain-containing protein.
   
 0.807
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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