STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PJT8_AMBTCProtein-S-isoprenylcysteine O-methyltransferase. (143 aa)    
Predicted Functional Partners:
W1NFJ3_AMBTC
Uncharacterized protein.
   
 0.953
W1NL11_AMBTC
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 0.937
W1PVG2_AMBTC
Abhydrolase_3 domain-containing protein.
     
 0.919
U5D651_AMBTC
Flavokinase domain-containing protein.
     
 0.560
U5DHX5_AMBTC
Uncharacterized protein.
      
 0.511
W1PF95_AMBTC
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
      
 0.511
W1PV16_AMBTC
C-CAP/cofactor C-like domain-containing protein.
      
 0.463
W1PPN9_AMBTC
Sld5 domain-containing protein.
      
 0.454
W1NDV0_AMBTC
Transket_pyr domain-containing protein.
      
 0.451
U5D3Y7_AMBTC
Peptidase_M48 domain-containing protein.
    
 
 0.401
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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