STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PNA0_AMBTCUncharacterized protein; Belongs to the cytochrome P450 family. (494 aa)    
Predicted Functional Partners:
U5CY86_AMBTC
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
 0.948
W1NLB2_AMBTC
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
     
 0.907
U5CWW9_AMBTC
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
 0.529
U5CXE4_AMBTC
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
 0.525
W1NR56_AMBTC
Uncharacterized protein.
  
  
 0.510
U5D8P2_AMBTC
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
     0.490
U5D8Q1_AMBTC
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
     0.490
U5D5T0_AMBTC
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
     0.478
U5CWU9_AMBTC
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
     0.476
W1PS75_AMBTC
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
     0.469
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.