STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PNA1_AMBTCUncharacterized protein; Belongs to the heat shock protein 70 family. (675 aa)    
Predicted Functional Partners:
U5D6M8_AMBTC
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
  
 
0.900
U5DEB7_AMBTC
Tim44 domain-containing protein.
   
 0.888
W1PJ56_AMBTC
Uncharacterized protein.
  
0.849
W1NDK0_AMBTC
J domain-containing protein.
  
 0.797
W1NYM6_AMBTC
Uncharacterized protein; Belongs to the chaperonin (HSP60) family.
  
 0.790
W1PDP1_AMBTC
Uncharacterized protein; Belongs to the chaperonin (HSP60) family.
  
 0.784
W1P3E7_AMBTC
Uncharacterized protein; Belongs to the chaperonin (HSP60) family.
  
 0.742
W1P6P5_AMBTC
Uncharacterized protein; Belongs to the chaperonin (HSP60) family.
  
 0.742
W1P987_AMBTC
Uncharacterized protein.
   
 
 0.734
W1NED3_AMBTC
Uncharacterized protein.
 
 0.720
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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