STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PNJ4_AMBTCSCP domain-containing protein; Belongs to the CRISP family. (165 aa)    
Predicted Functional Partners:
W1PDP4_AMBTC
SCP domain-containing protein; Belongs to the CRISP family.
  
  
 
0.904
W1PBZ3_AMBTC
SCP domain-containing protein; Belongs to the CRISP family.
  
  
 
0.903
W1NLJ5_AMBTC
Chitin-binding type-1 domain-containing protein.
   
  
 0.602
W1NLM8_AMBTC
Chitin-binding type-1 domain-containing protein.
   
  
 0.602
W1NMC1_AMBTC
Glyco_hydro_19_cat domain-containing protein.
   
  
 0.602
W1NMC3_AMBTC
Chitin-binding type-1 domain-containing protein.
   
  
 0.602
W1P2F6_AMBTC
Glyco_hydro_19_cat domain-containing protein.
   
  
 0.602
W1NDW2_AMBTC
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.551
W1P7T9_AMBTC
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.551
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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