STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PPV5_AMBTCWD_REPEATS_REGION domain-containing protein. (640 aa)    
Predicted Functional Partners:
W1NK52_AMBTC
CPSF_A domain-containing protein.
    
 0.983
W1NUM2_AMBTC
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.977
W1PDV2_AMBTC
WD_REPEATS_REGION domain-containing protein.
  
  
 0.962
W1PPV7_AMBTC
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
  
 0.955
W1NI23_AMBTC
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.952
W1PPJ2_AMBTC
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.952
W1NTJ8_AMBTC
Zf-primase domain-containing protein.
   
  
 0.928
W1PVI7_AMBTC
RING-type domain-containing protein.
    
 0.892
U5CYT4_AMBTC
Uncharacterized protein.
   
  
 0.871
W1NNC2_AMBTC
Uncharacterized protein.
   
  
 0.871
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
Server load: low (24%) [HD]