W1PRT5_AMBTC protein (Amborella trichopoda) - STRING interaction network

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Predicted Interactions

gene neighborhood

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protein homology

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Score

W1PRT5_AMBTC

PSP domain-containing protein. (104 aa)

Predicted Functional Partners:

W1PDX2_AMBTC

0.967

U5D042_AMBTC

0.966

W1NDX8_AMBTC

0.963

U5DA74_AMBTC

0.958

U5D9H7_AMBTC

0.955

W1NLN7_AMBTC

0.953

W1PZJ3_AMBTC

0.952

U5CW72_AMBTC

0.945

W1P339_AMBTC

0.943

W1PYG2_AMBTC

0.943

Your Current Organism:

Amborella trichopoda

NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
U5CW72_AMBTC	U5D042_AMBTC	U5CW72	U5D042	Uncharacterized protein.	RRM domain-containing protein.	0.996
U5CW72_AMBTC	U5D9H7_AMBTC	U5CW72	U5D9H7	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.945
U5CW72_AMBTC	U5DA74_AMBTC	U5CW72	U5DA74	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.965
U5CW72_AMBTC	W1NDX8_AMBTC	U5CW72	W1NDX8	Uncharacterized protein.	Small nuclear ribonucleoprotein-associated protein.	0.948
U5CW72_AMBTC	W1NLN7_AMBTC	U5CW72	W1NLN7	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.976
U5CW72_AMBTC	W1P339_AMBTC	U5CW72	W1P339	Uncharacterized protein.	CPSF_A domain-containing protein.	0.996
U5CW72_AMBTC	W1PDX2_AMBTC	U5CW72	W1PDX2	Uncharacterized protein.	Uncharacterized protein.	0.995
U5CW72_AMBTC	W1PRT5_AMBTC	U5CW72	W1PRT5	Uncharacterized protein.	PSP domain-containing protein.	0.945
U5CW72_AMBTC	W1PYG2_AMBTC	U5CW72	W1PYG2	Uncharacterized protein.	CPSF_A domain-containing protein.	0.996
U5CW72_AMBTC	W1PZJ3_AMBTC	U5CW72	W1PZJ3	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.973
U5D042_AMBTC	U5CW72_AMBTC	U5D042	U5CW72	RRM domain-containing protein.	Uncharacterized protein.	0.996
U5D042_AMBTC	U5D9H7_AMBTC	U5D042	U5D9H7	RRM domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.981
U5D042_AMBTC	U5DA74_AMBTC	U5D042	U5DA74	RRM domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.965
U5D042_AMBTC	W1NDX8_AMBTC	U5D042	W1NDX8	RRM domain-containing protein.	Small nuclear ribonucleoprotein-associated protein.	0.905
U5D042_AMBTC	W1NLN7_AMBTC	U5D042	W1NLN7	RRM domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.968
U5D042_AMBTC	W1P339_AMBTC	U5D042	W1P339	RRM domain-containing protein.	CPSF_A domain-containing protein.	0.996
U5D042_AMBTC	W1PDX2_AMBTC	U5D042	W1PDX2	RRM domain-containing protein.	Uncharacterized protein.	0.998
U5D042_AMBTC	W1PRT5_AMBTC	U5D042	W1PRT5	RRM domain-containing protein.	PSP domain-containing protein.	0.966
U5D042_AMBTC	W1PYG2_AMBTC	U5D042	W1PYG2	RRM domain-containing protein.	CPSF_A domain-containing protein.	0.996
U5D042_AMBTC	W1PZJ3_AMBTC	U5D042	W1PZJ3	RRM domain-containing protein.	Small nuclear ribonucleoprotein G.	0.988