STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PSU8_AMBTCPeptidase_S8 domain-containing protein. (411 aa)    
Predicted Functional Partners:
W1NQE8_AMBTC
Fn3_6 domain-containing protein.
 
     0.567
U5CVR1_AMBTC
Uncharacterized protein.
  
     0.529
U5D6X4_AMBTC
Peptidase_S8 domain-containing protein.
  
     0.529
W1PKD7_AMBTC
Peptidase_S8 domain-containing protein.
 
     0.529
W1PLX5_AMBTC
Uncharacterized protein; Belongs to the peptidase S8 family.
 
     0.519
U5DA81_AMBTC
Fn3_6 domain-containing protein.
  
     0.517
W1PXV5_AMBTC
Fn3_6 domain-containing protein.
 
     0.512
W1PFD4_AMBTC
Uncharacterized protein.
  
     0.504
W1P0H1_AMBTC
Peptidase_S8 domain-containing protein.
  
     0.498
U5DB30_AMBTC
Uncharacterized protein.
  
     0.472
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.