STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PUJ6_AMBTCBUB1 N-terminal domain-containing protein. (392 aa)    
Predicted Functional Partners:
W1PI60_AMBTC
HORMA domain-containing protein.
   
 0.984
W1NP83_AMBTC
Uncharacterized protein.
    
 0.951
W1NIP3_AMBTC
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.950
W1NRY7_AMBTC
Uncharacterized protein.
    
 0.941
W1PE19_AMBTC
APC1_C domain-containing protein.
   
 0.941
W1PH49_AMBTC
Uncharacterized protein.
    
 0.937
W1NHA0_AMBTC
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.936
W1PK69_AMBTC
Uncharacterized protein.
   
 0.926
W1PFN1_AMBTC
WD_REPEATS_REGION domain-containing protein.
   
 0.907
W1PT86_AMBTC
WD_REPEATS_REGION domain-containing protein.
   
 0.907
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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