STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PWF7_AMBTCCarrier domain-containing protein. (2320 aa)    
Predicted Functional Partners:
U5CQT7_AMBTC
Uncharacterized protein.
  
0.701
U5D5K2_AMBTC
Uncharacterized protein.
  
 
 0.484
W1PVB8_AMBTC
Elf4 domain-containing protein.
  
 
 0.484
W1NER4_AMBTC
Uncharacterized protein.
   
  0.483
W1NK96_AMBTC
Uncharacterized protein.
    
  0.469
U5DAT1_AMBTC
Uncharacterized protein.
  
 
  0.462
U5D9D7_AMBTC
ETF domain-containing protein.
  
 
 0.455
U5CPI4_AMBTC
Uncharacterized protein.
  
     0.447
W1P3F8_AMBTC
Uncharacterized protein.
      
 0.444
U5D139_AMBTC
Chorismate synthase.
    
 0.442
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.