STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PWL3_AMBTCGlyco_tran_28_C domain-containing protein. (198 aa)    
Predicted Functional Partners:
W1PTD4_AMBTC
Uncharacterized protein.
   
 0.991
U5CZV2_AMBTC
Uncharacterized protein.
   
 0.977
U5CZ49_AMBTC
Glyco_trans_4-like_N domain-containing protein.
    
 0.975
W1PAV0_AMBTC
Uncharacterized protein.
    
 0.605
W1NVQ4_AMBTC
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
      
 0.531
W1PIJ5_AMBTC
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
      
 0.510
W1NV46_AMBTC
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
      
 0.509
W1P0S4_AMBTC
Mannosyltransferase.
      
 0.509
W1P5H3_AMBTC
Uncharacterized protein.
      
 0.508
W1PD47_AMBTC
Glyco_trans_2-like domain-containing protein.
     
 0.501
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.