STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PWP2_AMBTCProtein kinase domain-containing protein. (191 aa)    
Predicted Functional Partners:
W1PZJ0_AMBTC
Uncharacterized protein.
    
 0.511
U5D1Q4_AMBTC
Uncharacterized protein.
    
 0.486
W1NMI1_AMBTC
Protein kinase domain-containing protein.
  
 
 
 0.486
W1NS52_AMBTC
Protein kinase domain-containing protein.
  
 
  0.460
W1PN83_AMBTC
Protein kinase domain-containing protein.
  
 
  0.439
U5D4F4_AMBTC
Protein kinase domain-containing protein.
  
     0.437
W1P044_AMBTC
Protein kinase domain-containing protein.
  
     0.424
W1PTV3_AMBTC
Protein kinase domain-containing protein.
  
 
  0.419
U5D6V0_AMBTC
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
     0.412
U5CTU4_AMBTC
Protein kinase domain-containing protein.
    
0.408
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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