STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PX41_AMBTCUncharacterized protein. (556 aa)    
Predicted Functional Partners:
U5D005_AMBTC
Uncharacterized protein.
  
 0.891
W1PJ72_AMBTC
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
  
 
 0.815
U5D611_AMBTC
Pterin-binding domain-containing protein.
  
 
 0.721
W1PPK0_AMBTC
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
 
 0.701
W1PCY2_AMBTC
MR_MLE domain-containing protein.
  
 
 0.688
W1PFP5_AMBTC
E1_dh domain-containing protein.
  
 
 0.679
U5DD23_AMBTC
Pyruvate carboxyltransferase domain-containing protein.
  
 
 0.668
W1NWR1_AMBTC
Pyruvate carboxyltransferase domain-containing protein.
  
 
 0.651
W1NDV0_AMBTC
Transket_pyr domain-containing protein.
  
 0.642
U5D252_AMBTC
Uncharacterized protein; Belongs to the TPP enzyme family.
  
 0.627
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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