STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PX49_AMBTCUncharacterized protein. (64 aa)    
Predicted Functional Partners:
U5CSR3_AMBTC
Glutamine amidotransferase type-2 domain-containing protein.
  
 
 0.743
W1NPL8_AMBTC
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 
 0.738
W1NJD0_AMBTC
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 
 0.715
W1NWM1_AMBTC
Rieske domain-containing protein.
   
 
 0.700
W1Q092_AMBTC
Glutamine amidotransferase type-2 domain-containing protein.
  
 
 0.700
W1NE75_AMBTC
Uncharacterized protein.
     
 0.689
U5D6G6_AMBTC
Uncharacterized protein.
    
 0.688
W1PJ72_AMBTC
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
     
 0.669
W1NSZ2_AMBTC
Thioredoxin reductase.
   
 0.623
W1P2M5_AMBTC
Uncharacterized protein; Belongs to the arginase family.
    
 0.621
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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