STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PYW4_AMBTCUncharacterized protein; Belongs to the GST superfamily. (285 aa)    
Predicted Functional Partners:
U5DC28_AMBTC
Uncharacterized protein.
 
 
 0.986
W1P283_AMBTC
Fumarylacetoacetase.
  
 
 0.979
W1NW17_AMBTC
Uncharacterized protein; Belongs to the GST superfamily.
  
  
 
0.902
W1NJN9_AMBTC
GST N-terminal domain-containing protein.
   
 0.797
W1NHZ1_AMBTC
Uncharacterized protein.
     
0.604
U5CN57_AMBTC
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.597
U5CXB9_AMBTC
EF1_GNE domain-containing protein.
   
 0.597
W1NYS6_AMBTC
Uncharacterized protein.
   
 0.597
W1PPQ0_AMBTC
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.597
U5CZT5_AMBTC
RPOLD domain-containing protein.
   
 
 0.593
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.