STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGN02655.1COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis. (1380 aa)    
Predicted Functional Partners:
AGN02656.1
Type II secretion system F domain-containing protein; COG2064 Flp pilus assembly protein TadC.
 
     0.891
AGN02657.1
Hypothetical protein.
       0.774
AGN02658.1
Hypothetical protein.
       0.774
AGN02659.1
Hypothetical protein.
       0.774
AGN02660.1
Hypothetical protein.
       0.774
AGN02661.1
Hypothetical protein.
       0.773
AGN02609.1
Archaeal flagella assembly protein J; COG2064 Flp pilus assembly protein TadC.
  
     0.481
rpl18e
COG1727 Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.
  
     0.422
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome.
  
   
 0.411
Your Current Organism:
Salinarchaeum sp. HarchtBsk1
NCBI taxonomy Id: 1333523
Other names: S. sp. Harcht-Bsk1, Salinarchaeum sp. Harcht-Bsk1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.