STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGN02953.1Hypothetical protein. (49 aa)    
Predicted Functional Partners:
AGN02954.1
COG2827 Predicted endonuclease containing a URI domain.
       0.692
AGN02952.1
COG1691 NCAIR mutase (PurE)-related proteins.
       0.565
AGN02955.1
COG1960 Acyl-CoA dehydrogenases.
       0.428
Your Current Organism:
Salinarchaeum sp. HarchtBsk1
NCBI taxonomy Id: 1333523
Other names: S. sp. Harcht-Bsk1, Salinarchaeum sp. Harcht-Bsk1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.