STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB560_006470ABC transmembrane type-1 domain-containing protein. (415 aa)    
Predicted Functional Partners:
BB560_006548
Uncharacterized protein.
    
 0.783
BB560_000927
Uncharacterized protein.
    
 0.783
BB560_001404
Uncharacterized protein.
   
 0.767
BB560_006882
ABC transporter domain-containing protein.
   
 0.717
BB560_003907
ABC transporter domain-containing protein.
   
 0.717
BB560_001925
Uncharacterized protein.
     
 0.698
BB560_004635
Uncharacterized protein.
   
 
 0.688
BB560_004606
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.654
BB560_005979
Uncharacterized protein.
    
  0.644
BB560_003747
Uncharacterized protein.
    
  0.644
Your Current Organism:
Smittium megazygosporum
NCBI taxonomy Id: 133381
Other names: S. megazygosporum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.