STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB560_002071Uncharacterized protein. (510 aa)    
Predicted Functional Partners:
BB560_000935
WD_REPEATS_REGION domain-containing protein.
    
 0.998
BB560_004567
Fip1 domain-containing protein.
   
 0.992
BB560_003571
Uncharacterized protein.
    
 0.992
BB560_002684
Uncharacterized protein.
  
 0.987
BB560_001911
CPSF_A domain-containing protein.
   
 0.986
BB560_004390
Triosephosphate isomerase.
  
 0.985
BB560_000259
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.983
BB560_004768
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 
 0.983
BB560_007181
Symplekin_C domain-containing protein.
    
 0.979
BB560_004170
Uncharacterized protein.
    
 0.979
Your Current Organism:
Smittium megazygosporum
NCBI taxonomy Id: 133381
Other names: S. megazygosporum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.