STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB560_004915Uncharacterized protein. (478 aa)    
Predicted Functional Partners:
BB560_004184
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.759
BB560_002418
Uncharacterized protein.
    
  0.585
BB560_002733
Uncharacterized protein.
    
 0.517
BB560_007056
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.471
BB560_001702
TFIID_20kDa domain-containing protein.
    
  0.471
BB560_001112
TAF domain-containing protein.
    
  0.467
BB560_000901
SCA7 domain-containing protein.
    
  0.467
BB560_003771
Uncharacterized protein.
    
  0.462
BB560_005242
Uncharacterized protein.
    
  0.455
BB560_001892
Uncharacterized protein.
    
  0.455
Your Current Organism:
Smittium megazygosporum
NCBI taxonomy Id: 133381
Other names: S. megazygosporum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.