Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BB560_001041 | BB560_001130 | A0A2T9ZIQ4 | A0A2T9ZIP1 | CDC73_C domain-containing protein. | Uncharacterized protein. | 0.999 |
BB560_001041 | BB560_001275 | A0A2T9ZIQ4 | A0A2T9ZI17 | CDC73_C domain-containing protein. | Uncharacterized protein. | 0.999 |
BB560_001041 | BB560_002264 | A0A2T9ZIQ4 | A0A2T9ZFA0 | CDC73_C domain-containing protein. | RPOLD domain-containing protein. | 0.950 |
BB560_001041 | BB560_002457 | A0A2T9ZIQ4 | A0A2T9ZER8 | CDC73_C domain-containing protein. | Uncharacterized protein. | 0.999 |
BB560_001041 | BB560_002822 | A0A2T9ZIQ4 | A0A2T9ZDU7 | CDC73_C domain-containing protein. | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | 0.990 |
BB560_001041 | BB560_003267 | A0A2T9ZIQ4 | A0A2T9ZCG6 | CDC73_C domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.999 |
BB560_001041 | BB560_003562 | A0A2T9ZIQ4 | A0A2T9ZBL8 | CDC73_C domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.978 |
BB560_001041 | BB560_004842 | A0A2T9ZIQ4 | A0A2T9Z849 | CDC73_C domain-containing protein. | Plus3 domain-containing protein. | 0.964 |
BB560_001041 | BB560_005767 | A0A2T9ZIQ4 | A0A2T9YXR1 | CDC73_C domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.956 |
BB560_001041 | BB560_006396 | A0A2T9ZIQ4 | A0A2T9Y728 | CDC73_C domain-containing protein. | Uncharacterized protein. | 0.967 |
BB560_001130 | BB560_001041 | A0A2T9ZIP1 | A0A2T9ZIQ4 | Uncharacterized protein. | CDC73_C domain-containing protein. | 0.999 |
BB560_001130 | BB560_001275 | A0A2T9ZIP1 | A0A2T9ZI17 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
BB560_001130 | BB560_002264 | A0A2T9ZIP1 | A0A2T9ZFA0 | Uncharacterized protein. | RPOLD domain-containing protein. | 0.976 |
BB560_001130 | BB560_002457 | A0A2T9ZIP1 | A0A2T9ZER8 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
BB560_001130 | BB560_002822 | A0A2T9ZIP1 | A0A2T9ZDU7 | Uncharacterized protein. | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | 0.987 |
BB560_001130 | BB560_003267 | A0A2T9ZIP1 | A0A2T9ZCG6 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.998 |
BB560_001130 | BB560_003562 | A0A2T9ZIP1 | A0A2T9ZBL8 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.968 |
BB560_001130 | BB560_004842 | A0A2T9ZIP1 | A0A2T9Z849 | Uncharacterized protein. | Plus3 domain-containing protein. | 0.963 |
BB560_001130 | BB560_005767 | A0A2T9ZIP1 | A0A2T9YXR1 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.942 |
BB560_001130 | BB560_006396 | A0A2T9ZIP1 | A0A2T9Y728 | Uncharacterized protein. | Uncharacterized protein. | 0.955 |
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