STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB560_004708Uncharacterized protein. (309 aa)    
Predicted Functional Partners:
BB560_004184
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.711
BB560_001727
Uncharacterized protein.
    
 0.645
BB560_004438
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.624
BB560_002175
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.624
BB560_003725
SKIP_SNW domain-containing protein.
    
  0.609
BB560_002739
Uncharacterized protein.
    
  0.552
BB560_006713
Uncharacterized protein; Belongs to the SKP1 family.
    
  0.551
BB560_004312
Uncharacterized protein.
    
 0.532
BB560_003735
WD_REPEATS_REGION domain-containing protein.
    
  0.530
BB560_006906
Uncharacterized protein.
    
  0.526
Your Current Organism:
Smittium megazygosporum
NCBI taxonomy Id: 133381
Other names: S. megazygosporum
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