STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB560_004446Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. (88 aa)    
Predicted Functional Partners:
BB560_003951
WD_REPEATS_REGION domain-containing protein.
    
 0.993
BB560_004907
Uncharacterized protein.
    
 
 0.955
BB560_001375
Uncharacterized protein.
    
 0.955
BB560_001376
Uncharacterized protein.
    
 0.955
BB560_000334
Uncharacterized protein.
    
 
 0.868
BB560_005128
Nucleoside diphosphate kinase.
    
   0.820
BB560_003438
CAP-Gly domain-containing protein.
    
 0.814
BB560_002966
Uncharacterized protein.
   
 0.806
BB560_005945
Uncharacterized protein.
    
 0.805
BB560_000656
Uncharacterized protein; Belongs to the actin family.
    
 0.805
Your Current Organism:
Smittium megazygosporum
NCBI taxonomy Id: 133381
Other names: S. megazygosporum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.