STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB560_004206Uncharacterized protein. (576 aa)    
Predicted Functional Partners:
BB560_004551
Uncharacterized protein.
    
 0.986
BB560_003175
Uncharacterized protein.
   
 0.986
BB560_003756
Uncharacterized protein.
    
 0.985
BB560_002510
WD_REPEATS_REGION domain-containing protein.
   
 0.982
BB560_000388
DEP domain-containing protein.
    
 0.982
BB560_002123
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.980
BB560_000608
WD_REPEATS_REGION domain-containing protein.
    
 0.979
BB560_005583
Zinc_ribbon_16 domain-containing protein.
    
 0.969
BB560_001602
Zinc_ribbon_16 domain-containing protein.
    
 0.969
BB560_003657
Uncharacterized protein.
    
 0.956
Your Current Organism:
Smittium megazygosporum
NCBI taxonomy Id: 133381
Other names: S. megazygosporum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.