STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB560_003884Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (408 aa)    
Predicted Functional Partners:
BB560_004185
COX2_CUA domain-containing protein.
    
 0.893
BB560_001780
Uncharacterized protein.
   
 0.855
BB560_005118
Uncharacterized protein.
   
 0.816
BB560_003454
Uncharacterized protein.
   
 0.816
BB560_005055
Uncharacterized protein.
   
 0.811
BB560_006820
Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.809
BB560_002252
Uncharacterized protein.
   
 0.772
BB560_005289
Uncharacterized protein.
     
 0.686
BB560_007277
Uncharacterized protein; Belongs to the peptidase M16 family.
   
 0.668
BB560_000600
Uncharacterized protein.
   
  0.659
Your Current Organism:
Smittium megazygosporum
NCBI taxonomy Id: 133381
Other names: S. megazygosporum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.