STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB560_002723Uncharacterized protein. (195 aa)    
Predicted Functional Partners:
BB560_000770
EMC1_C domain-containing protein.
   
 
 0.961
BB560_000601
DUF2012 domain-containing protein.
    
 
 0.960
BB560_005851
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.959
BB560_005904
Uncharacterized protein.
    
 
 0.958
BB560_004397
Uncharacterized protein.
    
 
 0.958
BB560_003400
Uncharacterized protein.
    
 
 0.955
BB560_006357
Uncharacterized protein.
    
 
 0.895
BB560_007316
Uncharacterized protein.
      
 0.436
BB560_005064
Uncharacterized protein.
      
 0.436
Your Current Organism:
Smittium megazygosporum
NCBI taxonomy Id: 133381
Other names: S. megazygosporum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.