STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB560_000245Uncharacterized protein. (223 aa)    
Predicted Functional Partners:
BB560_004747
Ribosomal_L7Ae domain-containing protein.
    
 0.797
BB560_006667
Thioredoxin domain-containing protein.
    
 0.524
BB560_006111
Thioredoxin domain-containing protein.
    
 0.524
BB560_004490
Uncharacterized protein.
    
 0.524
BB560_004065
Thioredoxin domain-containing protein.
    
 0.524
BB560_003685
Thioredoxin; Belongs to the thioredoxin family.
    
 0.524
BB560_001648
Uncharacterized protein.
    
 0.524
BB560_006649
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
    
 
 0.443
BB560_000532
Guanylate kinase-like domain-containing protein.
   
   0.441
BB560_002684
Uncharacterized protein.
    
   0.436
Your Current Organism:
Smittium megazygosporum
NCBI taxonomy Id: 133381
Other names: S. megazygosporum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.