STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB560_00017840S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (145 aa)    
Predicted Functional Partners:
BB560_006551
40S ribosomal protein S27.
   
 0.999
BB560_005768
40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.
   
 0.999
BB560_004254
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
  
 0.999
BB560_004043
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
BB560_003952
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 0.999
BB560_003799
S4 RNA-binding domain-containing protein.
  
 0.999
BB560_003770
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
  
 0.999
BB560_000857
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
BB560_003656
Uncharacterized protein.
  
 0.999
BB560_003482
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
  
 0.999
Your Current Organism:
Smittium megazygosporum
NCBI taxonomy Id: 133381
Other names: S. megazygosporum
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