STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g8115Conserved oligomeric Golgi complex subunit 4. (1019 aa)    
Predicted Functional Partners:
AYI68_g7103
Uncharacterized protein.
    
 0.997
AYI68_g6763
Uncharacterized protein.
    
 0.997
AYI68_g1825
Conserved oligomeric Golgi complex subunit 5.
    
 0.997
AYI68_g762
Conserved oligomeric Golgi complex subunit 2.
   
 0.997
AYI68_g2274
Syntaxin-5.
    
 0.852
AYI68_g4679
Vacuolar protein sorting-associated protein 54, chloroplastic.
    
 0.811
AYI68_g1462
Vacuolar protein sorting-associated protein 52 B.
   
 
 0.803
AYI68_g1450
Vacuolar protein sorting-associated protein 53-like protein.
   
 
 0.801
AYI68_g6977
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.794
AYI68_g3975
Vesicle transport v-SNARE protein vti1.
     
 0.793
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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