STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g7369Uncharacterized protein. (108 aa)    
Predicted Functional Partners:
AYI68_g1035
Ubiquitin-40S ribosomal protein S27a.
    
  0.565
AYI68_g7243
Ankyrin repeat protein nuc-2.
    
 0.550
AYI68_g5107
Ankyrin repeat protein nuc-2.
    
 0.550
AYI68_g1435
60S ribosomal protein L21-A.
   
   0.544
AYI68_g6290
Glycerophosphodiester phosphodiesterase GDE1.
    
  0.536
AYI68_g2224
Glycerophosphodiester phosphodiesterase gde1.
    
  0.536
AYI68_g7743
Histone H2A deubiquitinase MYSM1.
    
  0.535
AYI68_g7587
Histone H2A deubiquitinase MYSM1.
    
  0.535
AYI68_g2001
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.521
AYI68_g1160
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
   
   0.516
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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