STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g6889Potassium voltage-gated channel protein egl-36. (279 aa)    
Predicted Functional Partners:
AYI68_g6071
60S ribosomal protein L35.
   
 0.973
AYI68_g8068
60S ribosomal protein L32.
  
 0.972
AYI68_g1952
60S ribosomal protein L24.
   
 0.972
AYI68_g5318
60S ribosomal protein L26-2.
  
 0.971
AYI68_g59
60S ribosomal protein L30-1.
   
 0.971
AYI68_g5527
60S ribosomal protein L33-A.
   
 0.970
AYI68_g4782
60S ribosomal protein L31.
   
 0.970
AYI68_g4458
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 0.970
AYI68_g2854
60S ribosomal protein L34-B.
  
 0.967
AYI68_g1136
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.967
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.