STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g542Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (234 aa)    
Predicted Functional Partners:
AYI68_g8336
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
 
 0.926
AYI68_g2326
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
 0.895
AYI68_g6254
Ribose-5-phosphate isomerase.
  
 0.890
AYI68_g332
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.880
AYI68_g1403
Anhydro-N-acetylmuramic acid kinase.
  
 0.866
AYI68_g3924
Xylulose kinase.
    
 0.865
AYI68_g3036
Fructose-1,6-bisphosphatase, cytosolic; Belongs to the FBPase class 1 family.
  
 
 0.860
AYI68_g5791
Enolase.
   
 0.859
AYI68_g5390
Triosephosphate isomerase.
  
 
 0.852
AYI68_g2106
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.850
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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