STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g606960S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)    
Predicted Functional Partners:
AYI68_g8068
60S ribosomal protein L32.
  
 0.999
AYI68_g7875
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.999
AYI68_g6568
60S ribosomal protein L9-A.
  
 0.999
AYI68_g6500
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 0.999
AYI68_g6458
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.999
AYI68_g6313
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.999
AYI68_g6071
60S ribosomal protein L35.
  
 0.999
AYI68_g5725
60S ribosomal protein L8.
  
 0.999
AYI68_g5527
60S ribosomal protein L33-A.
   
 0.999
AYI68_g5355
Ribosomal protein L37; Binds to the 23S rRNA.
  
 0.999
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.