STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g5827Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (478 aa)    
Predicted Functional Partners:
AYI68_g6910
Multifunctional tryptophan biosynthesis protein.
    
 0.899
AYI68_g4317
Multifunctional tryptophan biosynthesis protein.
    
 0.899
AYI68_g5313
Putative cystathionine gamma-synthase.
  
 0.869
AYI68_g2291
Putative trans-sulfuration enzyme.
  
 0.868
AYI68_g8023
Tryptophan synthase.
    
 0.839
AYI68_g7051
Tryptophan synthase.
    
 0.839
AYI68_g6106
Adenosylhomocysteinase.
  
 0.797
AYI68_g8356
Sulfite reductase [NADPH] subunit beta.
  
 
 0.792
AYI68_g2687
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.759
AYI68_g6032
Cystathionine beta-lyase.
  
 0.751
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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