Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AYI68_g3108 | AYI68_g3337 | A0A1R0H0V4 | A0A1R0H065 | Uncharacterized protein. | Exosome complex component RRP4. | 0.720 |
AYI68_g3108 | AYI68_g3867 | A0A1R0H0V4 | A0A1R0GYP5 | Uncharacterized protein. | General negative regulator of transcription subunit 1. | 0.463 |
AYI68_g3108 | AYI68_g4535 | A0A1R0H0V4 | A0A1R0GWU9 | Uncharacterized protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.997 |
AYI68_g3108 | AYI68_g5131 | A0A1R0H0V4 | A0A1R0GV62 | Uncharacterized protein. | Exosome complex component SKI6. | 0.769 |
AYI68_g3108 | AYI68_g5247 | A0A1R0H0V4 | A0A1R0GUT1 | Uncharacterized protein. | Zinc finger CCCH domain-containing protein 28. | 0.707 |
AYI68_g3108 | AYI68_g6066 | A0A1R0H0V4 | A0A1R0GSG4 | Uncharacterized protein. | Uncharacterized protein. | 0.922 |
AYI68_g3108 | AYI68_g6154 | A0A1R0H0V4 | A0A1R0GS87 | Uncharacterized protein. | Uncharacterized protein. | 0.922 |
AYI68_g3108 | AYI68_g7131 | A0A1R0H0V4 | A0A1R0GPL8 | Uncharacterized protein. | Uncharacterized protein. | 0.922 |
AYI68_g3337 | AYI68_g3108 | A0A1R0H065 | A0A1R0H0V4 | Exosome complex component RRP4. | Uncharacterized protein. | 0.720 |
AYI68_g3337 | AYI68_g4535 | A0A1R0H065 | A0A1R0GWU9 | Exosome complex component RRP4. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.693 |
AYI68_g3337 | AYI68_g5131 | A0A1R0H065 | A0A1R0GV62 | Exosome complex component RRP4. | Exosome complex component SKI6. | 0.999 |
AYI68_g3337 | AYI68_g5247 | A0A1R0H065 | A0A1R0GUT1 | Exosome complex component RRP4. | Zinc finger CCCH domain-containing protein 28. | 0.665 |
AYI68_g3337 | AYI68_g6066 | A0A1R0H065 | A0A1R0GSG4 | Exosome complex component RRP4. | Uncharacterized protein. | 0.638 |
AYI68_g3337 | AYI68_g6154 | A0A1R0H065 | A0A1R0GS87 | Exosome complex component RRP4. | Uncharacterized protein. | 0.638 |
AYI68_g3337 | AYI68_g7131 | A0A1R0H065 | A0A1R0GPL8 | Exosome complex component RRP4. | Uncharacterized protein. | 0.638 |
AYI68_g3840 | AYI68_g5247 | A0A1R0GYX7 | A0A1R0GUT1 | 14-3-3 protein 2; Belongs to the 14-3-3 family. | Zinc finger CCCH domain-containing protein 28. | 0.634 |
AYI68_g3867 | AYI68_g3108 | A0A1R0GYP5 | A0A1R0H0V4 | General negative regulator of transcription subunit 1. | Uncharacterized protein. | 0.463 |
AYI68_g3867 | AYI68_g4535 | A0A1R0GYP5 | A0A1R0GWU9 | General negative regulator of transcription subunit 1. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.461 |
AYI68_g3867 | AYI68_g5247 | A0A1R0GYP5 | A0A1R0GUT1 | General negative regulator of transcription subunit 1. | Zinc finger CCCH domain-containing protein 28. | 0.668 |
AYI68_g4535 | AYI68_g3108 | A0A1R0GWU9 | A0A1R0H0V4 | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | Uncharacterized protein. | 0.997 |
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