STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g4180Kinesin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1087 aa)    
Predicted Functional Partners:
AYI68_g1028
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 
 0.812
AYI68_g1633
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 
 0.805
AYI68_g6201
Tropomyosin-2.
    
 
 0.684
AYI68_g7832
Dynactin subunit 1.
    
 0.676
AYI68_g7826
Dynactin subunit 1.
    
 0.676
AYI68_g1783
Casein kinase II subunit alpha-2; Belongs to the protein kinase superfamily.
    
 0.661
AYI68_g5899
Putative 125 kDa kinesin-related protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
0.655
AYI68_g4532
Anaphase-promoting complex subunit 3.
   
 0.649
AYI68_g6462
UBA domain-containing protein 7.
   
 0.648
AYI68_g382
General transcriptional corepressor ssn6.
   
 0.639
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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