STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g3808CHY-type domain-containing protein. (828 aa)    
Predicted Functional Partners:
AYI68_g3507
N-acetyltransferase eso1.
    
 0.707
AYI68_g1035
Ubiquitin-40S ribosomal protein S27a.
    
  0.657
AYI68_g4197
Polyubiquitin.
    
 0.652
AYI68_g5154
UV excision repair protein rhp23.
    
 0.525
AYI68_g7232
Ubiquitin domain-containing protein DSK2.
    
  0.523
AYI68_g4254
Deubiquitination-protection protein dph1.
    
  0.523
AYI68_g2942
Uncharacterized protein.
    
  0.523
AYI68_g2666
Protein pob1.
    
  0.523
AYI68_g4654
Replication factor C subunit 5.
   
 
  0.507
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.