AYI68_g3673 protein (Smittium mucronatum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AYI68_g3673

PH domain-containing protein. (1461 aa)

Predicted Functional Partners:

AYI68_g3976

0.657

AYI68_g7743

0.617

AYI68_g7587

0.617

AYI68_g3361

0.522

AYI68_g3743

0.448

AYI68_g7221

0.430

AYI68_g1028

0.424

AYI68_g3531

0.417

AYI68_g1035

0.417

AYI68_g4612

0.413

Your Current Organism:

Smittium mucronatum

NCBI taxonomy Id: 133383
Other names: S. mucronatum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AYI68_g1028	AYI68_g1035	A0A1R0H6I0	A0A1R0H6J6	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Ubiquitin-40S ribosomal protein S27a.	0.432
AYI68_g1028	AYI68_g3673	A0A1R0H6I0	A0A1R0GZ95	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	PH domain-containing protein.	0.424
AYI68_g1028	AYI68_g7587	A0A1R0H6I0	A0A1R0GN84	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Histone H2A deubiquitinase MYSM1.	0.688
AYI68_g1028	AYI68_g7743	A0A1R0H6I0	A0A1R0GMT6	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Histone H2A deubiquitinase MYSM1.	0.863
AYI68_g1035	AYI68_g1028	A0A1R0H6J6	A0A1R0H6I0	Ubiquitin-40S ribosomal protein S27a.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.432
AYI68_g1035	AYI68_g3531	A0A1R0H6J6	A0A1R0GVY5	Ubiquitin-40S ribosomal protein S27a.	N-chimaerin.	0.686
AYI68_g1035	AYI68_g3673	A0A1R0H6J6	A0A1R0GZ95	Ubiquitin-40S ribosomal protein S27a.	PH domain-containing protein.	0.417
AYI68_g1035	AYI68_g7221	A0A1R0H6J6	A0A1R0GPA2	Ubiquitin-40S ribosomal protein S27a.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.635
AYI68_g1035	AYI68_g7587	A0A1R0H6J6	A0A1R0GN84	Ubiquitin-40S ribosomal protein S27a.	Histone H2A deubiquitinase MYSM1.	0.979
AYI68_g1035	AYI68_g7743	A0A1R0H6J6	A0A1R0GMT6	Ubiquitin-40S ribosomal protein S27a.	Histone H2A deubiquitinase MYSM1.	0.993
AYI68_g3361	AYI68_g3531	A0A1R0H050	A0A1R0GVY5	Uncharacterized protein.	N-chimaerin.	0.944
AYI68_g3361	AYI68_g3673	A0A1R0H050	A0A1R0GZ95	Uncharacterized protein.	PH domain-containing protein.	0.522
AYI68_g3531	AYI68_g1035	A0A1R0GVY5	A0A1R0H6J6	N-chimaerin.	Ubiquitin-40S ribosomal protein S27a.	0.686
AYI68_g3531	AYI68_g3361	A0A1R0GVY5	A0A1R0H050	N-chimaerin.	Uncharacterized protein.	0.944
AYI68_g3531	AYI68_g3673	A0A1R0GVY5	A0A1R0GZ95	N-chimaerin.	PH domain-containing protein.	0.417
AYI68_g3531	AYI68_g7587	A0A1R0GVY5	A0A1R0GN84	N-chimaerin.	Histone H2A deubiquitinase MYSM1.	0.603
AYI68_g3531	AYI68_g7743	A0A1R0GVY5	A0A1R0GMT6	N-chimaerin.	Histone H2A deubiquitinase MYSM1.	0.671
AYI68_g3673	AYI68_g1028	A0A1R0GZ95	A0A1R0H6I0	PH domain-containing protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.424
AYI68_g3673	AYI68_g1035	A0A1R0GZ95	A0A1R0H6J6	PH domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.417
AYI68_g3673	AYI68_g3361	A0A1R0GZ95	A0A1R0H050	PH domain-containing protein.	Uncharacterized protein.	0.522