STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g3571Retrovirus-related Pol polyprotein from transposon 17.6. (170 aa)    
Predicted Functional Partners:
AYI68_g3709
ATP-dependent DNA helicase MPH1.
    
  0.790
AYI68_g668
Histone-binding protein RBBP4.
    
 0.584
AYI68_g1907
Uncharacterized protein.
    
  0.566
AYI68_g335
dUTPase domain-containing protein.
    
  0.554
AYI68_g4449
Retrovirus-related Pol polyprotein from transposon opus.
  
     0.541
AYI68_g5486
Transposon Ty3-I Gag-Pol polyprotein.
 
     0.533
AYI68_g7766
Pol polyprotein.
  
     0.523
AYI68_g8058
Transposon Tf2-6 polyprotein.
 
     0.514
AYI68_g3087
Transposon Ty3-I Gag-Pol polyprotein.
  
     0.502
AYI68_g3637
Pol polyprotein.
  
     0.498
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.