STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g3388General transcription factor 3C polypeptide 3. (410 aa)    
Predicted Functional Partners:
AYI68_g4612
General transcription factor 3C polypeptide 5.
   
 0.971
AYI68_g1643
Transcription factor IIIB 60 kDa subunit.
    
 0.970
AYI68_g4183
Uncharacterized protein.
    
 0.919
AYI68_g3560
Transcription factor TFIIIB component B.
   
 0.907
AYI68_g325
Uncharacterized protein.
   
   0.883
AYI68_g8339
Cleavage and polyadenylation specificity factor subunit 2.
    
   0.881
AYI68_g3639
Cleavage and polyadenylation specificity factor subunit 1.
    
   0.881
AYI68_g1572
Cleavage stimulating factor 64.
   
   0.881
AYI68_g1431
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.796
AYI68_g664
TATA-box-binding protein.
    
 0.791
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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