STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g2920PH domain-containing protein. (911 aa)    
Predicted Functional Partners:
AYI68_g4278
Tyrosine--tRNA ligase.
  
 
 0.734
AYI68_g5207
54S ribosomal protein L10, mitochondrial.
   
 
 0.681
AYI68_g5236
Translation initiation factor IF-2, mitochondrial.
  
 
 0.678
AYI68_g3231
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.667
AYI68_g2745
50S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.661
AYI68_g1967
Putative 37S ribosomal protein mrp2, mitochondrial.
   
 
 0.659
AYI68_g6313
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 
 0.638
AYI68_g2499
30S ribosomal protein S12.
   
 
 0.630
AYI68_g4579
Eukaryotic translation initiation factor 5B.
  
 
 0.621
AYI68_g4572
50S ribosomal protein L27.
  
 
 0.619
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.