Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AYI68_g1012 | AYI68_g1655 | A0A1R0H6S0 | A0A1R0H4N9 | RNA polymerase-associated protein CTR9-like protein. | Uncharacterized protein. | 0.999 |
AYI68_g1012 | AYI68_g1908 | A0A1R0H6S0 | A0A1R0H484 | RNA polymerase-associated protein CTR9-like protein. | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | 0.995 |
AYI68_g1012 | AYI68_g2802 | A0A1R0H6S0 | A0A1R0H1R0 | RNA polymerase-associated protein CTR9-like protein. | Cell division control protein 73. | 0.999 |
AYI68_g1012 | AYI68_g3119 | A0A1R0H6S0 | A0A1R0H0T4 | RNA polymerase-associated protein CTR9-like protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.967 |
AYI68_g1012 | AYI68_g3150 | A0A1R0H6S0 | A0A1R0H0S1 | RNA polymerase-associated protein CTR9-like protein. | RNA polymerase-associated protein. | 0.993 |
AYI68_g1012 | AYI68_g5327 | A0A1R0H6S0 | A0A1R0GUL5 | RNA polymerase-associated protein CTR9-like protein. | Histone H2B; Belongs to the histone H2B family. | 0.970 |
AYI68_g1012 | AYI68_g5349 | A0A1R0H6S0 | A0A1R0GUH2 | RNA polymerase-associated protein CTR9-like protein. | Uncharacterized protein. | 0.999 |
AYI68_g1012 | AYI68_g617 | A0A1R0H6S0 | A0A1R0GMS8 | RNA polymerase-associated protein CTR9-like protein. | FACT complex subunit spt16. | 0.988 |
AYI68_g1012 | AYI68_g6711 | A0A1R0H6S0 | A0A1R0GQP9 | RNA polymerase-associated protein CTR9-like protein. | WD repeat-containing protein 61. | 0.997 |
AYI68_g1655 | AYI68_g1012 | A0A1R0H4N9 | A0A1R0H6S0 | Uncharacterized protein. | RNA polymerase-associated protein CTR9-like protein. | 0.999 |
AYI68_g1655 | AYI68_g1908 | A0A1R0H4N9 | A0A1R0H484 | Uncharacterized protein. | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | 0.999 |
AYI68_g1655 | AYI68_g2802 | A0A1R0H4N9 | A0A1R0H1R0 | Uncharacterized protein. | Cell division control protein 73. | 0.999 |
AYI68_g1655 | AYI68_g3119 | A0A1R0H4N9 | A0A1R0H0T4 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.880 |
AYI68_g1655 | AYI68_g3150 | A0A1R0H4N9 | A0A1R0H0S1 | Uncharacterized protein. | RNA polymerase-associated protein. | 0.999 |
AYI68_g1655 | AYI68_g5327 | A0A1R0H4N9 | A0A1R0GUL5 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.999 |
AYI68_g1655 | AYI68_g5349 | A0A1R0H4N9 | A0A1R0GUH2 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
AYI68_g1655 | AYI68_g617 | A0A1R0H4N9 | A0A1R0GMS8 | Uncharacterized protein. | FACT complex subunit spt16. | 0.999 |
AYI68_g1655 | AYI68_g6711 | A0A1R0H4N9 | A0A1R0GQP9 | Uncharacterized protein. | WD repeat-containing protein 61. | 0.997 |
AYI68_g1908 | AYI68_g1012 | A0A1R0H484 | A0A1R0H6S0 | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | RNA polymerase-associated protein CTR9-like protein. | 0.995 |
AYI68_g1908 | AYI68_g1655 | A0A1R0H484 | A0A1R0H4N9 | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | Uncharacterized protein. | 0.999 |
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