STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g2257Ubiquitin-protein ligase E3A. (428 aa)    
Predicted Functional Partners:
AYI68_g4197
Polyubiquitin.
   
 0.734
AYI68_g3099
Ubiquitin-conjugating enzyme E2 36.
    
 0.666
AYI68_g4510
Tuberous sclerosis 2 protein-like protein.
    
 0.661
AYI68_g5154
UV excision repair protein rhp23.
    
 0.655
AYI68_g3873
Uracil phosphoribosyltransferase 1.
    
  0.648
AYI68_g7833
Ubiquitin-conjugating enzyme E2 T.
    
 0.647
AYI68_g7827
Ubiquitin-conjugating enzyme E2 T.
    
 0.647
AYI68_g4123
Ubiquitin-conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.647
AYI68_g8266
Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.621
AYI68_g3472
26S proteasome non-ATPase regulatory subunit 4-like protein.
    
 
 0.595
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.