STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g1790Tip elongation aberrant protein Tea4. (1182 aa)    
Predicted Functional Partners:
AYI68_g4569
Tip elongation aberrant protein 1.
    
 
 0.839
AYI68_g5223
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.666
AYI68_g5812
Serine/threonine-protein phosphatase PP-Z.
    
 
 0.666
AYI68_g7743
Histone H2A deubiquitinase MYSM1.
    
 0.656
AYI68_g7587
Histone H2A deubiquitinase MYSM1.
    
 0.652
AYI68_g1558
Ubiquitin-like protein pmt3/smt3.
    
  0.563
AYI68_g3840
14-3-3 protein 2; Belongs to the 14-3-3 family.
   
 0.552
AYI68_g642
DNA damage checkpoint protein rad24; Belongs to the 14-3-3 family.
   
 0.552
AYI68_g1028
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.543
AYI68_g7273
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.542
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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