STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g1422Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial. (284 aa)    
Predicted Functional Partners:
AYI68_g7056
Oleate-induced peroxisomal protein POX18.
   
 0.875
AYI68_g4963
Peroxisomal targeting signal 1 receptor.
    
 0.843
AYI68_g7527
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.776
AYI68_g629
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.776
AYI68_g628
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.776
AYI68_g7142
Enoyl-CoA delta isomerase 1, mitochondrial.
  
 0.745
AYI68_g6312
Peroxisomal hydratase-dehydrogenase-epimerase.
   
 0.711
AYI68_g3203
Peroxisomal hydratase-dehydrogenase-epimerase.
   
 0.711
AYI68_g1904
Peroxisomal membrane protein PAS20.
     
 0.707
AYI68_g6007
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
 
 0.706
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.