STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g1220Meiotic recombination protein SPO11. (793 aa)    
Predicted Functional Partners:
AYI68_g6711
WD repeat-containing protein 61.
    
 
 0.868
AYI68_g6360
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
    
 0.784
AYI68_g5905
DNA repair protein RAD50.
    
 0.766
AYI68_g2001
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.759
AYI68_g8380
Uncharacterized protein.
    
 0.754
AYI68_g5237
Meiotic recombination protein DMC1/LIM15-like protein; Belongs to the RecA family.
    
 0.754
AYI68_g3709
ATP-dependent DNA helicase MPH1.
    
 
 0.716
AYI68_g1271
Crossover junction endonuclease mus81.
    
 
 0.694
AYI68_g4935
Cohesin subunit rad21.
    
 
 0.603
AYI68_g3405
DNA repair protein rhp54.
    
 
 0.585
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.